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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170656100
JTFN01133827
30311
Bacteroidota
GGA
Ser
>WENV170655388
JTFN01027936
112241
Bacteroidota
CAA
Leu
>WENV170656074
JTFN01126138
112241
Bacteroidota
CAA
Leu
>WENV170655391
JTFN01027983
454129
Bacteroidota
TTT
Lys
>WENV170655654
JTFN01055165
454129
Bacteroidota
TTT
Lys
>WENV170655484
JTFN01036634
655465
Bacteroidota
TTC
Glu
>WENV170655240
JTFN01013891
451431
Bacteroidota
CCA
Trp
>WENV170655492
JTFN01037718
451431
Bacteroidota
CCA
Trp
>WENV170655708
JTFN01059849
451431
Bacteroidota
CCA
Trp
>WENV170655491
JTFN01037460
279189
Bacteroidota
GTT
Asn
>WENV170655266
JTFN01015823
653774
Bacteroidota
CAT
Met
>WENV170655823
JTFN01080103
271642
Bacteroidota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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