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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170656032
JTFN01118790
272303
Bacteroidota
TGG
Pro
>WENV170655391
JTFN01027983
509539
Bacteroidota
TTT
Lys
>WENV170655654
JTFN01055165
509539
Bacteroidota
TTT
Lys
>WENV170655484
JTFN01036634
733363
Bacteroidota
TTC
Glu
>WENV170655786
JTFN01073964
310035
Bacteroidota
CGG
Pro
>WENV170655823
JTFN01080103
310303
Bacteroidota
TCT
Arg
>WENV170655491
JTFN01037460
310039
Bacteroidota
GTT
Asn
>WENV170655399
JTFN01028528
53239
Bacteroidota
GCT
Ser
>WENV170655388
JTFN01027936
128389
Bacteroidota
CAA
Leu
>WENV170656074
JTFN01126138
128389
Bacteroidota
CAA
Leu
>WENV170656056
JTFN01122302
311873
Bacteroidota
GTC
Asp
>WENV170655240
JTFN01013891
515435
Bacteroidota
CCA
Trp
>WENV170655492
JTFN01037718
515435
Bacteroidota
CCA
Trp
>WENV170655708
JTFN01059849
515435
Bacteroidota
CCA
Trp
>WENV170655169
JTFN01009640
515326
Bacteroidota
GCC
Gly
>WENV170655266
JTFN01015823
733364
Bacteroidota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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