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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170655244
JTFN01014181
271705
Gammaproteobacteria
TGG
Pro
>WENV170655353
JTFN01024180
271705
Gammaproteobacteria
TGG
Pro
>WENV170655252
JTFN01014614
454971
Gammaproteobacteria
TTT
Lys
>WENV170655253
JTFN01014614
454971
Gammaproteobacteria
TTT
Lys
>WENV170655085
JTFN01004263
270873
Gammaproteobacteria
GAT
Ile
>WENV170655702
JTFN01059242
179986
Gammaproteobacteria
TAG
Leu
>WENV170655207
JTFN01011456
780242
Gammaproteobacteria
GCA
Cys
>WENV170655525
JTFN01041503
451780
Gammaproteobacteria
GCC
Gly
>WENV170655639
JTFN01053795
451780
Gammaproteobacteria
GCC
Gly
>WENV170655871
JTFN01089250
451780
Gammaproteobacteria
GCC
Gly
>WENV170655872
JTFN01089250
451780
Gammaproteobacteria
GCC
Gly
>WENV170655873
JTFN01089250
451780
Gammaproteobacteria
GCC
Gly
>WENV170655425
JTFN01030846
451841
Gammaproteobacteria
GGC
Ala
>WENV170655811
JTFN01078156
86896
Gammaproteobacteria
GGA
Ser
>WENV170655365
JTFN01025772
451785
Gammaproteobacteria
GAA
Phe
>WENV170655306
JTFN01019906
451779
Gammaproteobacteria
CAT
Met
>WENV170656028
JTFN01117701
464809
Gammaproteobacteria
GAA
Phe
>WENV170655464
JTFN01034748
275791
Gammaproteobacteria
GAT
Ile
>WENV170655875
JTFN01089436
275791
Gammaproteobacteria
GAT
Ile
>WENV170656019
JTFN01115863
275791
Gammaproteobacteria
GAT
Ile
>WENV170655756
JTFN01069835
218021
Gammaproteobacteria
GAG
Leu
>WENV170655444
JTFN01032643
454460
Gammaproteobacteria
GTT
Asn
>WENV170655233
JTFN01013617
273869
Gammaproteobacteria
GTT
Asn
>WENV170655234
JTFN01013617
273869
Gammaproteobacteria
GTT
Asn
>WENV170655041
JTFN01002495
271868
Gammaproteobacteria
GAC
Val
>WENV170655795
JTFN01075039
270822
Gammaproteobacteria
CCA
Trp
>WENV170655168
JTFN01009630
179988
Gammaproteobacteria
TAG
Leu
>WENV170656051
JTFN01121455
179988
Gammaproteobacteria
TAG
Leu
>WENV170656053
JTFN01121455
179988
Gammaproteobacteria
TAG
Leu
>WENV170655998
JTFN01111920
270872
Gammaproteobacteria
CCG
Arg
>WENV170655033
JTFN01002319
456234
Gammaproteobacteria
GAA
Phe
>WENV170655367
JTFN01025772
451783
Gammaproteobacteria
GTT
Asn
>WENV170655369
JTFN01025772
451783
Gammaproteobacteria
GTT
Asn
>WENV170655535
JTFN01042464
657394
Gammaproteobacteria
GGT
Thr
>WENV170655975
JTFN01105461
657394
Gammaproteobacteria
GGT
Thr
>WENV170655534
JTFN01042464
657393
Gammaproteobacteria
TCC
Gly
>WENV170655538
JTFN01042465
657393
Gammaproteobacteria
TCC
Gly
>WENV170655974
JTFN01105461
657393
Gammaproteobacteria
TCC
Gly
>WENV170655693
JTFN01058889
274204
Gammaproteobacteria
GGG
Pro
>WENV170655701
JTFN01059242
179987
Gammaproteobacteria
TAG
Leu
>WENV170655276
JTFN01016638
451781
Gammaproteobacteria
GGT
Thr
>WENV170655703
JTFN01059242
653554
Gammaproteobacteria
TTG
Gln
>WENV170656050
JTFN01121455
653554
Gammaproteobacteria
TTG
Gln
>WENV170656052
JTFN01121455
653554
Gammaproteobacteria
TTG
Gln
>WENV170656055
JTFN01121455
653554
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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