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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170668680
LAHQ01013888
274638
Euryarchaeota
TGC
Ala
>WENV170668889
LAHQ01093033
243681
Euryarchaeota
CAT
Met
>WENV170668615
LAHQ01005063
655774
Euryarchaeota
GAA
Phe
>WENV170668915
LAHQ01119733
294627
Euryarchaeota
TGT
Thr
>WENV170668625
LAHQ01006089
274633
Euryarchaeota
GCC
Gly
>WENV170668588
LAHQ01002477
87401
Euryarchaeota
GCT
Ser
>WENV170668820
LAHQ01057109
87401
Euryarchaeota
GCT
Ser
>WENV170668853
LAHQ01067305
241182
Euryarchaeota
TGG
Pro
>WENV170668916
LAHQ01119733
241182
Euryarchaeota
TGG
Pro
>WENV170668926
LAHQ01128623
229218
Euryarchaeota
CGA
Ser
>WENV170668622
LAHQ01005627
456306
Euryarchaeota
GTT
Asn
>WENV170668834
LAHQ01061972
655547
Euryarchaeota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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