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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
67 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170683076
LFIK01004467
653537
Alphaproteobacteria
GGT
Thr
>WENV170682543
LFIK01000279
273797
Alphaproteobacteria
GGG
Pro
>WENV170682615
LFIK01000540
273797
Alphaproteobacteria
GGG
Pro
>WENV170682577
LFIK01000425
655167
Alphaproteobacteria
TTC
Glu
>WENV170682605
LFIK01000497
655167
Alphaproteobacteria
TTC
Glu
>WENV170682685
LFIK01000893
655167
Alphaproteobacteria
TTC
Glu
>WENV170682773
LFIK01001151
655167
Alphaproteobacteria
TTC
Glu
>WENV170682920
LFIK01002703
655167
Alphaproteobacteria
TTC
Glu
>WENV170683272
LFIK01008037
655167
Alphaproteobacteria
TTC
Glu
>WENV170683294
LFIK01008403
786788
Alphaproteobacteria
CTG
Gln
>WENV170682597
LFIK01000462
183008
Alphaproteobacteria
TAG
Leu
>WENV170682675
LFIK01000816
183008
Alphaproteobacteria
TAG
Leu
>WENV170682657
LFIK01000738
655623
Alphaproteobacteria
GCC
Gly
>WENV170682690
LFIK01000929
655623
Alphaproteobacteria
GCC
Gly
>WENV170682987
LFIK01003087
456410
Alphaproteobacteria
CGT
Thr
>WENV170682473
LFIK01000165
454623
Alphaproteobacteria
TAC
Val
>WENV170683278
LFIK01008230
454623
Alphaproteobacteria
TAC
Val
>WENV170683225
LFIK01007366
780661
Alphaproteobacteria
GCA
Cys
>WENV170682571
LFIK01000390
277700
Alphaproteobacteria
GTG
His
>WENV170683261
LFIK01007869
277700
Alphaproteobacteria
GTG
His
>WENV170683277
LFIK01008149
277700
Alphaproteobacteria
GTG
His
>WENV170682517
LFIK01000226
277700
Alphaproteobacteria
GTG
His
>WENV170682945
LFIK01002972
656305
Alphaproteobacteria
CAC
Val
>WENV170683210
LFIK01006871
656305
Alphaproteobacteria
CAC
Val
>WENV170683084
LFIK01004563
456891
Alphaproteobacteria
CGT
Thr
>WENV170683142
LFIK01005379
456891
Alphaproteobacteria
CGT
Thr
>WENV170683513
LFIK01014219
456891
Alphaproteobacteria
CGT
Thr
>WENV170682815
LFIK01001451
278344
Alphaproteobacteria
CAT
Met
>WENV170682763
LFIK01001123
653532
Alphaproteobacteria
GTT
Asn
>WENV170682771
LFIK01001142
653532
Alphaproteobacteria
GTT
Asn
>WENV170682818
LFIK01001491
653532
Alphaproteobacteria
GTT
Asn
>WENV170682852
LFIK01001760
653532
Alphaproteobacteria
GTT
Asn
>WENV170683010
LFIK01003413
653532
Alphaproteobacteria
GTT
Asn
>WENV170682574
LFIK01000415
653581
Alphaproteobacteria
GCC
Gly
>WENV170682782
LFIK01001251
653581
Alphaproteobacteria
GCC
Gly
>WENV170682831
LFIK01001549
653581
Alphaproteobacteria
GCC
Gly
>WENV170683123
LFIK01005154
653581
Alphaproteobacteria
GCC
Gly
>WENV170683454
LFIK01011916
653581
Alphaproteobacteria
GCC
Gly
>WENV170682383
LFIK01000043
454059
Alphaproteobacteria
TTT
Lys
>WENV170683568
LFIK01015680
113188
Alphaproteobacteria
GAG
Leu
>WENV170682381
LFIK01000040
454701
Alphaproteobacteria
GAA
Phe
>WENV170682784
LFIK01001263
454701
Alphaproteobacteria
GAA
Phe
>WENV170683269
LFIK01007978
282922
Alphaproteobacteria
CCA
Trp
>WENV170682434
LFIK01000116
780327
Alphaproteobacteria
GCA
Cys
>WENV170682602
LFIK01000488
780327
Alphaproteobacteria
GCA
Cys
>WENV170682392
LFIK01000052
270796
Alphaproteobacteria
GTC
Asp
>WENV170682420
LFIK01000102
270796
Alphaproteobacteria
GTC
Asp
>WENV170682488
LFIK01000197
270796
Alphaproteobacteria
GTC
Asp
>WENV170682892
LFIK01002303
270796
Alphaproteobacteria
GTC
Asp
>WENV170683490
LFIK01013069
270796
Alphaproteobacteria
GTC
Asp
>WENV170683567
LFIK01015633
270796
Alphaproteobacteria
GTC
Asp
>WENV170682484
LFIK01000189
46262
Alphaproteobacteria
CGA
Ser
>WENV170682616
LFIK01000540
46262
Alphaproteobacteria
CGA
Ser
>WENV170683014
LFIK01003467
46262
Alphaproteobacteria
CGA
Ser
>WENV170683648
LFIK01017817
46262
Alphaproteobacteria
CGA
Ser
>WENV170682787
LFIK01001284
112802
Alphaproteobacteria
GAG
Leu
>WENV170682765
LFIK01001126
457351
Alphaproteobacteria
TTC
Glu
>WENV170683579
LFIK01016213
457351
Alphaproteobacteria
TTC
Glu
>WENV170682486
LFIK01000194
287497
Alphaproteobacteria
GTC
Asp
>WENV170683162
LFIK01005780
287497
Alphaproteobacteria
GTC
Asp
>WENV170682789
LFIK01001306
654103
Alphaproteobacteria
GAA
Phe
>WENV170682813
LFIK01001440
654103
Alphaproteobacteria
GAA
Phe
>WENV170683093
LFIK01004708
654103
Alphaproteobacteria
GAA
Phe
>WENV170682923
LFIK01002757
275989
Alphaproteobacteria
CAT
Met
>WENV170682926
LFIK01002782
275989
Alphaproteobacteria
CAT
Met
>WENV170683289
LFIK01008274
275989
Alphaproteobacteria
CAT
Met
>WENV170682766
LFIK01001126
180898
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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