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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170697034
LGVF01074117
334731
Campylobacterota
TCC
Gly
>WENV170697307
LGVF01110029
334731
Campylobacterota
TCC
Gly
>WENV170696931
LGVF01062059
750686
Campylobacterota
GGT
Thr
>WENV170697088
LGVF01079271
750686
Campylobacterota
GGT
Thr
>WENV170696281
LGVF01009505
335788
Campylobacterota
TGG
Pro
>WENV170696812
LGVF01051864
335788
Campylobacterota
TGG
Pro
>WENV170696562
LGVF01027857
734636
Campylobacterota
GTT
Asn
>WENV170696572
LGVF01028686
734636
Campylobacterota
GTT
Asn
>WENV170696824
LGVF01052964
734636
Campylobacterota
GTT
Asn
>WENV170696248
LGVF01007233
540439
Campylobacterota
TAC
Val
>WENV170696196
LGVF01002119
318213
Campylobacterota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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