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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170738402
LULP01000111
655225
Alphaproteobacteria
TTG
Gln
>WENV170738346
LULP01000019
455173
Alphaproteobacteria
GAA
Phe
>WENV170738430
LULP01000213
180542
Alphaproteobacteria
TAG
Leu
>WENV170738370
LULP01000057
780260
Alphaproteobacteria
GCA
Cys
>WENV170738879
LULP01006039
218220
Alphaproteobacteria
>WENV170738332
LULP01000003
655301
Alphaproteobacteria
GGT
Thr
>WENV170738340
LULP01000011
45981
Alphaproteobacteria
TGA
Ser
>WENV170739108
LULP01022330
277664
Alphaproteobacteria
GTC
Asp
>WENV170739048
LULP01016643
452894
Alphaproteobacteria
CCA
Trp
>WENV170738374
LULP01000070
459032
Alphaproteobacteria
CCA
Trp
>WENV170738649
LULP01001529
780299
Alphaproteobacteria
TCC
Gly
>WENV170738351
LULP01000021
274039
Alphaproteobacteria
CAT
Met
>WENV170738360
LULP01000035
455172
Alphaproteobacteria
GGC
Ala
>WENV170738412
LULP01000145
655300
Alphaproteobacteria
GTT
Asn
>WENV170738994
LULP01012109
454512
Alphaproteobacteria
CCA
Trp
>WENV170738817
LULP01004625
270796
Alphaproteobacteria
GTC
Asp
>WENV170739106
LULP01021804
655361
Alphaproteobacteria
GCC
Gly
>WENV170738970
LULP01009714
655271
Alphaproteobacteria
GGT
Thr
>WENV170738676
LULP01001950
656140
Alphaproteobacteria
GAC
Val
>WENV170738365
LULP01000050
455171
Alphaproteobacteria
CGT
Thr
>WENV170738333
LULP01000003
273907
Alphaproteobacteria
ACG
Arg
>WENV170738404
LULP01000122
780298
Alphaproteobacteria
CTG
Gln
>WENV170739077
LULP01020122
112839
Alphaproteobacteria
CAG
Leu
>WENV170738334
LULP01000003
180543
Alphaproteobacteria
CAA
Leu
>WENV170739005
LULP01013181
780039
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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