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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170750820
LUMH01002143
455176
Cyanobacteriota
GTG
His
>WENV170750652
LUMH01000109
458794
Cyanobacteriota
CAT
Met
>WENV170750730
LUMH01000572
46559
Cyanobacteriota
GGA
Ser
>WENV170750782
LUMH01001236
181217
Cyanobacteriota
CAA
Leu
>WENV170750615
LUMH01000030
73049
Cyanobacteriota
TAA
Leu
>WENV170750760
LUMH01000904
277353
Cyanobacteriota
ACG
Arg
>WENV170750703
LUMH01000391
657291
Cyanobacteriota
GGT
Thr
>WENV170750663
LUMH01000164
654134
Cyanobacteriota
GTT
Asn
>WENV170750753
LUMH01000757
779735
Cyanobacteriota
TCC
Gly
>WENV170751012
LUMH01011331
277354
Cyanobacteriota
GGG
Pro
>WENV170750799
LUMH01001592
20153
Cyanobacteriota
GCT
Ser
>WENV170750790
LUMH01001517
454022
Cyanobacteriota
TGC
Ala
>WENV170750786
LUMH01001429
272148
Cyanobacteriota
CAT
Met
>WENV170750629
LUMH01000074
657285
Cyanobacteriota
TTG
Gln
>WENV170750842
LUMH01002636
655307
Cyanobacteriota
TGT
Thr
>WENV170750692
LUMH01000335
46524
Cyanobacteriota
TGA
Ser
>WENV170750780
LUMH01001177
271967
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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