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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170756771
LUMP01001112
273835
Bacteroidota
GTT
Asn
>WENV170756581
LUMP01000156
452741
Bacteroidota
TCC
Gly
>WENV170756671
LUMP01000470
452741
Bacteroidota
TCC
Gly
>WENV170756502
LUMP01000041
452487
Bacteroidota
CCA
Trp
>WENV170756583
LUMP01000156
452487
Bacteroidota
CCA
Trp
>WENV170756560
LUMP01000123
655825
Bacteroidota
TTC
Glu
>WENV170756734
LUMP01000819
278725
Bacteroidota
GTT
Asn
>WENV170756509
LUMP01000048
86958
Bacteroidota
TGA
Ser
>WENV170756464
LUMP01000008
240683
Bacteroidota
TGG
Pro
>WENV170756496
LUMP01000036
275165
Bacteroidota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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