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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170786296
MDSV01000953
655310
Cyanobacteriota
GTT
Asn
>WENV170788617
MDSV01036591
655310
Cyanobacteriota
GTT
Asn
>WENV170792003
MDSV01092367
655310
Cyanobacteriota
GTT
Asn
>WENV170801312
MDSV01244751
655310
Cyanobacteriota
GTT
Asn
>WENV170789757
MDSV01054844
455176
Cyanobacteriota
GTG
His
>WENV170790394
MDSV01065342
455176
Cyanobacteriota
GTG
His
>WENV170791135
MDSV01077513
455176
Cyanobacteriota
GTG
His
>WENV170796726
MDSV01168720
455176
Cyanobacteriota
GTG
His
>WENV170794415
MDSV01131924
19914
Cyanobacteriota
GCT
Ser
>WENV170799292
MDSV01211124
19914
Cyanobacteriota
GCT
Ser
>WENV170797504
MDSV01181363
466527
Cyanobacteriota
GTG
His
>WENV170798777
MDSV01202068
466527
Cyanobacteriota
GTG
His
>WENV170788079
MDSV01027305
453784
Cyanobacteriota
GGC
Ala
>WENV170790159
MDSV01061622
458794
Cyanobacteriota
CAT
Met
>WENV170797994
MDSV01189663
46559
Cyanobacteriota
GGA
Ser
>WENV170792680
MDSV01103501
661714
Cyanobacteriota
GAC
Val
>WENV170796139
MDSV01159654
274043
Cyanobacteriota
CCG
Arg
>WENV170797818
MDSV01186773
274043
Cyanobacteriota
CCG
Arg
>WENV170800613
MDSV01233215
274043
Cyanobacteriota
CCG
Arg
>WENV170788788
MDSV01039430
274043
Cyanobacteriota
CCG
Arg
>WENV170791961
MDSV01091800
274043
Cyanobacteriota
CCG
Arg
>WENV170793545
MDSV01118097
661332
Cyanobacteriota
TTG
Gln
>WENV170800271
MDSV01227303
661332
Cyanobacteriota
TTG
Gln
>WENV170788927
MDSV01041713
661332
Cyanobacteriota
TTG
Gln
>WENV170788503
MDSV01034687
654126
Cyanobacteriota
GTT
Asn
>WENV170795012
MDSV01141228
112853
Cyanobacteriota
CAG
Leu
>WENV170788933
MDSV01041836
112853
Cyanobacteriota
CAG
Leu
>WENV170792154
MDSV01095139
277353
Cyanobacteriota
ACG
Arg
>WENV170792761
MDSV01104499
277353
Cyanobacteriota
ACG
Arg
>WENV170800957
MDSV01238828
657291
Cyanobacteriota
GGT
Thr
>WENV170787713
MDSV01022266
657291
Cyanobacteriota
GGT
Thr
>WENV170795274
MDSV01145724
274052
Cyanobacteriota
CAT
Met
>WENV170798904
MDSV01204361
274052
Cyanobacteriota
CAT
Met
>WENV170792242
MDSV01096534
274052
Cyanobacteriota
CAT
Met
>WENV170791281
MDSV01080315
459193
Cyanobacteriota
CGT
Thr
>WENV170793078
MDSV01110260
459193
Cyanobacteriota
CGT
Thr
>WENV170795126
MDSV01142945
459193
Cyanobacteriota
CGT
Thr
>WENV170801148
MDSV01241835
274048
Cyanobacteriota
TGG
Pro
>WENV170788147
MDSV01028674
274048
Cyanobacteriota
TGG
Pro
>WENV170794033
MDSV01125637
654134
Cyanobacteriota
GTT
Asn
>WENV170797274
MDSV01177911
654134
Cyanobacteriota
GTT
Asn
>WENV170798276
MDSV01193869
654134
Cyanobacteriota
GTT
Asn
>WENV170800142
MDSV01225140
654134
Cyanobacteriota
GTT
Asn
>WENV170786630
MDSV01006300
654134
Cyanobacteriota
GTT
Asn
>WENV170792540
MDSV01101487
654134
Cyanobacteriota
GTT
Asn
>WENV170793139
MDSV01111179
654134
Cyanobacteriota
GTT
Asn
>WENV170793426
MDSV01116057
274045
Cyanobacteriota
GTC
Asp
>WENV170800775
MDSV01235832
274045
Cyanobacteriota
GTC
Asp
>WENV170795013
MDSV01141228
154050
Cyanobacteriota
CAA
Leu
>WENV170788932
MDSV01041836
154050
Cyanobacteriota
CAA
Leu
>WENV170789756
MDSV01054844
154050
Cyanobacteriota
CAA
Leu
>WENV170797454
MDSV01180567
277354
Cyanobacteriota
GGG
Pro
>WENV170801562
MDSV01249003
277354
Cyanobacteriota
GGG
Pro
>WENV170791935
MDSV01091278
277354
Cyanobacteriota
GGG
Pro
>WENV170786628
MDSV01006255
20153
Cyanobacteriota
GCT
Ser
>WENV170795606
MDSV01151634
458795
Cyanobacteriota
GGC
Ala
>WENV170796167
MDSV01160026
458795
Cyanobacteriota
GGC
Ala
>WENV170799576
MDSV01215734
458795
Cyanobacteriota
GGC
Ala
>WENV170800503
MDSV01231221
458795
Cyanobacteriota
GGC
Ala
>WENV170800983
MDSV01239270
458795
Cyanobacteriota
GGC
Ala
>WENV170801160
MDSV01242077
458795
Cyanobacteriota
GGC
Ala
>WENV170788821
MDSV01040110
458795
Cyanobacteriota
GGC
Ala
>WENV170789265
MDSV01047479
458795
Cyanobacteriota
GGC
Ala
>WENV170789877
MDSV01056905
458795
Cyanobacteriota
GGC
Ala
>WENV170790590
MDSV01068667
458795
Cyanobacteriota
GGC
Ala
>WENV170792401
MDSV01099033
458795
Cyanobacteriota
GGC
Ala
>WENV170794942
MDSV01140004
458795
Cyanobacteriota
GGC
Ala
>WENV170797005
MDSV01173325
272148
Cyanobacteriota
CAT
Met
>WENV170789228
MDSV01046860
272148
Cyanobacteriota
CAT
Met
>WENV170792887
MDSV01106881
272148
Cyanobacteriota
CAT
Met
>WENV170790157
MDSV01061608
657285
Cyanobacteriota
TTG
Gln
>WENV170797625
MDSV01183253
655305
Cyanobacteriota
GAC
Val
>WENV170792204
MDSV01096101
655305
Cyanobacteriota
GAC
Val
>WENV170795564
MDSV01150774
46524
Cyanobacteriota
TGA
Ser
>WENV170798282
MDSV01193923
284371
Cyanobacteriota
CGG
Pro
>WENV170792381
MDSV01098682
455178
Cyanobacteriota
CGC
Ala
>WENV170795196
MDSV01144338
284301
Cyanobacteriota
CAT
Met
>WENV170796832
MDSV01170410
284301
Cyanobacteriota
CAT
Met
>WENV170799531
MDSV01215116
284301
Cyanobacteriota
CAT
Met
>WENV170789175
MDSV01046015
284301
Cyanobacteriota
CAT
Met
>WENV170788493
MDSV01034482
271967
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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