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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170891485
MDTD01024682
653760
Actinomycetota
TAC
Val
>WENV170902744
MDTD01190626
451519
Actinomycetota
CCT
Arg
>WENV170892671
MDTD01041167
30489
Actinomycetota
CGA
Ser
>WENV170897265
MDTD01108681
30489
Actinomycetota
CGA
Ser
>WENV170903513
MDTD01203104
452678
Actinomycetota
ACG
Arg
>WENV170891366
MDTD01022837
278978
Actinomycetota
CAT
Met
>WENV170901572
MDTD01172432
459508
Actinomycetota
GTT
Asn
>WENV170892608
MDTD01040498
653411
Actinomycetota
TGT
Thr
>WENV170892687
MDTD01041434
653758
Actinomycetota
CAC
Val
>WENV170894273
MDTD01063174
272594
Actinomycetota
CAT
Met
>WENV170896473
MDTD01096064
454538
Actinomycetota
ACG
Arg
>WENV170897370
MDTD01110617
465518
Actinomycetota
CTT
Lys
>WENV170898887
MDTD01132432
88360
Actinomycetota
TGA
Ser
>WENV170900579
MDTD01156333
271157
Actinomycetota
TCT
Arg
>WENV170895229
MDTD01076738
281472
Actinomycetota
GGG
Pro
>WENV170898857
MDTD01132028
780710
Actinomycetota
CCC
Gly
>WENV170890774
MDTD01014845
452215
Actinomycetota
CCA
Trp
>WENV170891826
MDTD01029493
271373
Actinomycetota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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