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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170895091
MDTD01074808
510329
Actinomycetota
GCC
Gly
>WENV170900914
MDTD01161628
510329
Actinomycetota
GCC
Gly
>WENV170901800
MDTD01175989
510329
Actinomycetota
GCC
Gly
>WENV170901572
MDTD01172432
509114
Actinomycetota
GTT
Asn
>WENV170896195
MDTD01091718
513988
Actinomycetota
GCC
Gly
>WENV170892687
MDTD01041434
740898
Actinomycetota
CAC
Val
>WENV170891786
MDTD01029025
513021
Actinomycetota
TGT
Thr
>WENV170891826
MDTD01029493
307005
Actinomycetota
GAT
Ile
>WENV170898887
MDTD01132432
99535
Actinomycetota
TGA
Ser
>WENV170900262
MDTD01151762
23750
Actinomycetota
GCT
Ser
>WENV170894697
MDTD01069296
532530
Actinomycetota
CGT
Thr
>WENV170891366
MDTD01022837
306589
Actinomycetota
>WENV170898857
MDTD01132028
871274
Actinomycetota
CCC
Gly
>WENV170896456
MDTD01095612
531401
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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