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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180068743
MPLZ02065951
271464
Gammaproteobacteria
TGG
Pro
>WENV180069744
MPLZ02127784
270982
Gammaproteobacteria
GAT
Ile
>WENV180070471
MPLZ02169423
270982
Gammaproteobacteria
GAT
Ile
>WENV180070750
MPLZ02188164
270982
Gammaproteobacteria
GAT
Ile
>WENV180068760
MPLZ02066529
272023
Gammaproteobacteria
GAT
Ile
>WENV180070768
MPLZ02189551
272023
Gammaproteobacteria
GAT
Ile
>WENV180071969
MPLZ02274017
272023
Gammaproteobacteria
GAT
Ile
>WENV180069222
MPLZ02093641
463383
Gammaproteobacteria
CCA
Trp
>WENV180068231
MPLZ02037809
780592
Gammaproteobacteria
CCC
Gly
>WENV180068939
MPLZ02075725
272104
Gammaproteobacteria
CGG
Pro
>WENV180069210
MPLZ02093255
275934
Gammaproteobacteria
GGG
Pro
>WENV180070707
MPLZ02185196
780765
Gammaproteobacteria
CCC
Gly
>WENV180068633
MPLZ02058864
780765
Gammaproteobacteria
CCC
Gly
>WENV180069303
MPLZ02098695
273327
Gammaproteobacteria
ACG
Arg
>WENV180070090
MPLZ02148630
451732
Gammaproteobacteria
GCC
Gly
>WENV180070042
MPLZ02145614
780764
Gammaproteobacteria
TCC
Gly
>WENV180069176
MPLZ02091389
466510
Gammaproteobacteria
GCC
Gly
>WENV180070151
MPLZ02152055
466510
Gammaproteobacteria
GCC
Gly
>WENV180068761
MPLZ02066529
466186
Gammaproteobacteria
TGC
Ala
>WENV180070769
MPLZ02189551
466186
Gammaproteobacteria
TGC
Ala
>WENV180071693
MPLZ02253128
466186
Gammaproteobacteria
TGC
Ala
>WENV180068893
MPLZ02073086
180477
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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