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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180104450
OAPC01009294
452486
Bacteroidota
TCC
Gly
>WENV180104503
OAPC01015458
456414
Bacteroidota
GAA
Phe
>WENV180104384
OAPC01004825
657523
Bacteroidota
TTC
Glu
>WENV180104851
OAPC01144476
241614
Bacteroidota
GAC
Val
>WENV180104604
OAPC01040038
452487
Bacteroidota
CCA
Trp
>WENV180104758
OAPC01095061
657856
Bacteroidota
TTC
Glu
>WENV180104488
OAPC01013266
655825
Bacteroidota
TTC
Glu
>WENV180104460
OAPC01010065
31447
Bacteroidota
GGA
Ser
>WENV180104842
OAPC01142171
464575
Bacteroidota
GCC
Gly
>WENV180104405
OAPC01005896
452277
Bacteroidota
CAT
Met
>WENV180104401
OAPC01005767
241407
Bacteroidota
TGG
Pro
>WENV180104911
OAPC01176807
657921
Bacteroidota
TTC
Glu
>WENV180104344
OAPC01002671
460269
Bacteroidota
CAT
Met
>WENV180104572
OAPC01033346
277953
Bacteroidota
GTC
Asp
>WENV180104449
OAPC01009294
180640
Bacteroidota
GTA
Tyr
>WENV180104595
OAPC01039027
86958
Bacteroidota
TGA
Ser
>WENV180104349
OAPC01002887
240659
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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