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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180120550
OASP01000002
270850
Bacteroidota
GGC
Ala
>WENV180120598
OASP01000019
779477
Bacteroidota
TTG
Gln
>WENV180120623
OASP01000033
653389
Bacteroidota
GGT
Thr
>WENV180120573
OASP01000006
30311
Bacteroidota
GGA
Ser
>WENV180120588
OASP01000014
779381
Bacteroidota
CTG
Gln
>WENV180120578
OASP01000009
153684
Bacteroidota
GTA
Tyr
>WENV180120580
OASP01000010
86859
Bacteroidota
TGA
Ser
>WENV180120581
OASP01000010
86859
Bacteroidota
TGA
Ser
>WENV180120561
OASP01000004
112296
Bacteroidota
GAG
Leu
>WENV180120589
OASP01000014
240600
Bacteroidota
GGG
Pro
>WENV180120565
OASP01000004
451454
Bacteroidota
CCC
Gly
>WENV180120648
OASP01000050
451484
Bacteroidota
CAT
Met
>WENV180120631
OASP01000038
270530
Bacteroidota
CAT
Met
>WENV180120567
OASP01000004
240627
Bacteroidota
TGG
Pro
>WENV180120543
OASP01000001
270851
Bacteroidota
TCT
Arg
>WENV180120587
OASP01000012
451808
Bacteroidota
CGT
Thr
>WENV180120601
OASP01000021
653565
Bacteroidota
CCT
Arg
>WENV180120541
OASP01000001
653377
Bacteroidota
CTC
Glu
>WENV180120582
OASP01000010
653350
Bacteroidota
GCA
Cys
>WENV180120557
OASP01000003
179978
Bacteroidota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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