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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180125848
OASZ01000149
270850
Bacteroidota
GGC
Ala
>WENV180125656
OASZ01000008
779477
Bacteroidota
TTG
Gln
>WENV180125979
OASZ01000295
779477
Bacteroidota
TTG
Gln
>WENV180125728
OASZ01000030
458130
Bacteroidota
TTT
Lys
>WENV180125681
OASZ01000020
30311
Bacteroidota
GGA
Ser
>WENV180125745
OASZ01000045
30311
Bacteroidota
GGA
Ser
>WENV180125744
OASZ01000045
87355
Bacteroidota
TGA
Ser
>WENV180125664
OASZ01000011
779381
Bacteroidota
CTG
Gln
>WENV180125671
OASZ01000014
153684
Bacteroidota
GTA
Tyr
>WENV180126574
OASZ01023016
153684
Bacteroidota
GTA
Tyr
>WENV180125743
OASZ01000045
86859
Bacteroidota
TGA
Ser
>WENV180125817
OASZ01000111
86859
Bacteroidota
TGA
Ser
>WENV180125862
OASZ01000174
86859
Bacteroidota
TGA
Ser
>WENV180125969
OASZ01000276
112296
Bacteroidota
GAG
Leu
>WENV180125665
OASZ01000011
240600
Bacteroidota
GGG
Pro
>WENV180125871
OASZ01000186
451454
Bacteroidota
CCC
Gly
>WENV180125795
OASZ01000092
241460
Bacteroidota
TAC
Val
>WENV180125796
OASZ01000092
241460
Bacteroidota
TAC
Val
>WENV180126046
OASZ01000377
451484
Bacteroidota
CAT
Met
>WENV180125780
OASZ01000082
653343
Bacteroidota
CCT
Arg
>WENV180125726
OASZ01000029
270530
Bacteroidota
CAT
Met
>WENV180126420
OASZ01005386
240627
Bacteroidota
TGG
Pro
>WENV180125735
OASZ01000034
270851
Bacteroidota
TCT
Arg
>WENV180125831
OASZ01000131
270851
Bacteroidota
TCT
Arg
>WENV180125818
OASZ01000113
451808
Bacteroidota
CGT
Thr
>WENV180125727
OASZ01000029
653565
Bacteroidota
CCT
Arg
>WENV180125730
OASZ01000030
653377
Bacteroidota
CTC
Glu
>WENV180125787
OASZ01000085
653377
Bacteroidota
CTC
Glu
>WENV180125801
OASZ01000096
653350
Bacteroidota
GCA
Cys
>WENV180125868
OASZ01000184
653350
Bacteroidota
GCA
Cys
>WENV180125647
OASZ01000006
179978
Bacteroidota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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