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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180131377
OATG01013737
468335
Verrucomicrobiota
CCA
Trp
>WENV180131303
OATG01007042
469002
Verrucomicrobiota
CGC
Ala
>WENV180131210
OATG01004467
468342
Verrucomicrobiota
>WENV180131254
OATG01005567
662558
Verrucomicrobiota
GCC
Gly
>WENV180131340
OATG01009814
784158
Verrucomicrobiota
TCC
Gly
>WENV180131368
OATG01012766
663148
Verrucomicrobiota
CCT
Arg
>WENV180131371
OATG01013296
663191
Verrucomicrobiota
TTG
Gln
>WENV180131268
OATG01005747
155851
Verrucomicrobiota
GTA
Tyr
>WENV180131384
OATG01014674
662766
Verrucomicrobiota
CTG
Gln
>WENV180131382
OATG01014608
183416
Verrucomicrobiota
TAG
Leu
>WENV180131262
OATG01005602
662760
Verrucomicrobiota
CAC
Val
>WENV180131408
OATG01019010
12844
Verrucomicrobiota
GCT
Ser
>WENV180131294
OATG01006724
31527
Verrucomicrobiota
GGA
Ser
>WENV180131370
OATG01013198
286765
Verrucomicrobiota
GGG
Pro
>WENV180131281
OATG01006065
470563
Verrucomicrobiota
GGC
Ala
>WENV180131375
OATG01013644
468989
Verrucomicrobiota
CTT
Lys
>WENV180131376
OATG01013644
468989
Verrucomicrobiota
CTT
Lys
>WENV180131424
OATG01023248
663166
Verrucomicrobiota
TGT
Thr
>WENV180131170
OATG01003720
663168
Verrucomicrobiota
GTT
Asn
>WENV180131374
OATG01013644
662761
Verrucomicrobiota
CGT
Thr
>WENV180131348
OATG01010198
662758
Verrucomicrobiota
GTG
His
>WENV180131353
OATG01011019
663178
Verrucomicrobiota
GAC
Val
>WENV180131331
OATG01009271
12872
Verrucomicrobiota
CGA
Ser
>WENV180131265
OATG01005706
470561
Verrucomicrobiota
TTC
Glu
>WENV180131323
OATG01008668
469030
Verrucomicrobiota
TTT
Lys
>WENV180131240
OATG01005258
470562
Verrucomicrobiota
CAT
Met
>WENV180131354
OATG01011155
286752
Verrucomicrobiota
TCT
Arg
>WENV180131389
OATG01015735
286773
Verrucomicrobiota
CGG
Pro
>WENV180131411
OATG01019710
663161
Verrucomicrobiota
TAC
Val
>WENV180131182
OATG01004022
286760
Verrucomicrobiota
CAT
Met
>WENV180131269
OATG01005778
662614
Verrucomicrobiota
GGT
Thr
>WENV180131339
OATG01009814
783783
Verrucomicrobiota
CCC
Gly
>WENV180131324
OATG01008689
663193
Verrucomicrobiota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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