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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
7 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1006541
SRR020488.127701
273754
Gammaproteobacteria
GTT
Asn
>SRA1006904
SRR020488.257654
458352
Gammaproteobacteria
TTG
Gln
>SRA1007209
SRR020488.376471
459731
Gammaproteobacteria
GGT
Thr
>SRA1006375
SRR020488.66604
453897
Gammaproteobacteria
TAC
Val
>SRA1006903
SRR020488.257654
181084
Gammaproteobacteria
TAG
Leu
>SRA1007102
SRR020488.334885
276372
Gammaproteobacteria
ACG
Arg
>SRA1007362
SRR020488.422338
274093
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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