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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1016558
SRR027217.409
275157
Alphaproteobacteria
TGG
Pro
>SRA1016559
SRR027217.884
275157
Alphaproteobacteria
TGG
Pro
>SRA1016560
SRR027217.1457
275157
Alphaproteobacteria
TGG
Pro
>SRA1016561
SRR027217.1650
275157
Alphaproteobacteria
TGG
Pro
>SRA1016562
SRR027217.1684
275157
Alphaproteobacteria
TGG
Pro
>SRA1016563
SRR027217.1758
275157
Alphaproteobacteria
TGG
Pro
>SRA1016565
SRR027217.1945
275157
Alphaproteobacteria
TGG
Pro
>SRA1016566
SRR027217.2080
275157
Alphaproteobacteria
TGG
Pro
>SRA1016567
SRR027217.2229
275157
Alphaproteobacteria
TGG
Pro
>SRA1016568
SRR027217.2360
275157
Alphaproteobacteria
TGG
Pro
>SRA1016569
SRR027217.2494
275157
Alphaproteobacteria
TGG
Pro
>SRA1016570
SRR027217.2511
275157
Alphaproteobacteria
TGG
Pro
>SRA1016571
SRR027217.2533
275157
Alphaproteobacteria
TGG
Pro
>SRA1016572
SRR027217.2626
275157
Alphaproteobacteria
TGG
Pro
>SRA1016573
SRR027217.2669
275157
Alphaproteobacteria
TGG
Pro
>SRA1016574
SRR027217.2805
275157
Alphaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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