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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV09002408
ADGC01001376
369487
Bacteroidota
>ENV09002857
ADGC01035955
26229
Bacteroidota
GCT
Ser
>ENV09002586
ADGC01006915
258208
Bacteroidota
TTT
Lys
>ENV09002651
ADGC01011052
155049
Bacteroidota
TAC
Val
>ENV09002434
ADGC01001807
225567
Bacteroidota
GGC
Ala
>ENV09002455
ADGC01002494
225567
Bacteroidota
GGC
Ala
>ENV09002618
ADGC01009437
402298
Bacteroidota
GGT
Thr
>ENV09002778
ADGC01024028
258198
Bacteroidota
GGG
Pro
>ENV09002797
ADGC01028132
51212
Bacteroidota
TAA
Leu
>ENV09002541
ADGC01004899
369490
Bacteroidota
CTC
Glu
>ENV09002766
ADGC01022524
369490
Bacteroidota
CTC
Glu
>ENV09002386
ADGC01000665
288453
Bacteroidota
>ENV09002788
ADGC01027515
288453
Bacteroidota
>ENV09002672
ADGC01011604
260181
Bacteroidota
CTT
Lys
>ENV09002673
ADGC01011604
260181
Bacteroidota
CTT
Lys
>ENV09002685
ADGC01013041
159414
Bacteroidota
GTG
His
>ENV09002841
ADGC01033386
159414
Bacteroidota
GTG
His
>ENV09002557
ADGC01006176
369492
Bacteroidota
GGT
Thr
>ENV09002444
ADGC01002152
313757
Bacteroidota
CTT
Lys
>ENV09002445
ADGC01002152
313757
Bacteroidota
CTT
Lys
>ENV09002446
ADGC01002152
313757
Bacteroidota
CTT
Lys
>ENV09002847
ADGC01034171
30978
Bacteroidota
GCT
Ser
>ENV09002374
ADGC01000149
275590
Bacteroidota
CGT
Thr
>ENV09002414
ADGC01001451
325106
Bacteroidota
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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