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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11101475
AGFS01031096
26104
Bacillota
CGA
Ser
>WENV170001403
AGFS01031096
26104
Bacillota
CGA
Ser
>WENV11101695
AGFS01108422
369759
Bacillota
TCC
Gly
>WENV170001623
AGFS01108422
369759
Bacillota
TCC
Gly
>WENV11101472
AGFS01029492
162958
Bacillota
CCT
Arg
>WENV170001400
AGFS01029492
162958
Bacillota
CCT
Arg
>WENV11101861
AGFS01162768
158503
Bacillota
>WENV170001789
AGFS01162768
158503
Bacillota
>WENV11101520
AGFS01047274
271437
Bacillota
CCA
Trp
>WENV11101868
AGFS01163800
271437
Bacillota
CCA
Trp
>WENV170001448
AGFS01047274
271437
Bacillota
CCA
Trp
>WENV11101821
AGFS01141086
269979
Bacillota
TAC
Val
>WENV11101625
AGFS01084286
64722
Bacillota
CAA
Leu
>WENV170001553
AGFS01084286
64722
Bacillota
CAA
Leu
>WENV11101483
AGFS01033648
12063
Bacillota
GGA
Ser
>WENV11101471
AGFS01029492
173942
Bacillota
ACG
Arg
>WENV170001399
AGFS01029492
173942
Bacillota
ACG
Arg
>WENV11101446
AGFS01022321
160143
Bacillota
>WENV170001374
AGFS01022321
160143
Bacillota
>WENV11101600
AGFS01075302
50982
Bacillota
TAA
Leu
>WENV170001528
AGFS01075302
50982
Bacillota
TAA
Leu
>WENV11101555
AGFS01060951
257158
Bacillota
CTT
Lys
>WENV170001483
AGFS01060951
257158
Bacillota
CTT
Lys
>WENV11101755
AGFS01122838
41165
Bacillota
TAA
Leu
>WENV11101800
AGFS01135526
261999
Bacillota
CTT
Lys
>WENV170001728
AGFS01135526
261999
Bacillota
CTT
Lys
>WENV11101705
AGFS01111655
41174
Bacillota
AAG
Leu
>WENV170001633
AGFS01111655
41174
Bacillota
AAG
Leu
>WENV170001749
AGFS01141086
292709
Bacillota
TAC
Val
>WENV170001796
AGFS01163800
283466
Bacillota
CCA
Trp
>WENV11101583
AGFS01066322
158500
Bacillota
GTT
Asn
>WENV170001511
AGFS01066322
158500
Bacillota
GTT
Asn
>WENV170001681
AGFS01122838
282700
Bacillota
TGT
Thr
>WENV170001745
AGFS01140069
282700
Bacillota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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