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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11101705
AGFS01111655
37528
Bacillota
AAG
Leu
>WENV170001633
AGFS01111655
37528
Bacillota
AAG
Leu
>WENV11101521
AGFS01048897
242961
Bacillota
GGT
Thr
>WENV170001449
AGFS01048897
242961
Bacillota
GGT
Thr
>WENV11101483
AGFS01033648
10912
Bacillota
GGA
Ser
>WENV170001411
AGFS01033648
10912
Bacillota
GGA
Ser
>WENV11101807
AGFS01136596
147639
Bacillota
ACG
Arg
>WENV170001735
AGFS01136596
147639
Bacillota
ACG
Arg
>WENV11101471
AGFS01029492
145118
Bacillota
ACG
Arg
>WENV170001399
AGFS01029492
145118
Bacillota
ACG
Arg
>WENV11101583
AGFS01066322
152125
Bacillota
GTT
Asn
>WENV170001511
AGFS01066322
152125
Bacillota
GTT
Asn
>WENV170001536
AGFS01076595
8087
Bacillota
TGA
Ser
>WENV11101608
AGFS01076595
8087
Bacillota
TGA
Ser
>WENV170001483
AGFS01060951
238415
Bacillota
CTT
Lys
>WENV11101555
AGFS01060951
238415
Bacillota
CTT
Lys
>WENV170001374
AGFS01022321
149248
Bacillota
CAT
Met
>WENV11101446
AGFS01022321
149248
Bacillota
CAT
Met
>WENV170001553
AGFS01084286
59274
Bacillota
CAA
Leu
>WENV11101625
AGFS01084286
59274
Bacillota
CAA
Leu
>WENV170001403
AGFS01031096
23699
Bacillota
CGA
Ser
>WENV11101475
AGFS01031096
23699
Bacillota
CGA
Ser
>WENV170001572
AGFS01092692
187795
Bacillota
TCT
Arg
>WENV11101644
AGFS01092692
187795
Bacillota
TCT
Arg
>WENV170001623
AGFS01108422
342865
Bacillota
TCC
Gly
>WENV11101695
AGFS01108422
342865
Bacillota
TCC
Gly
>WENV11101496
AGFS01041107
147496
Bacillota
TCT
Arg
>WENV170001424
AGFS01041107
147496
Bacillota
TCT
Arg
>WENV170001789
AGFS01162768
198710
Bacillota
CAT
Met
>WENV11101861
AGFS01162768
198710
Bacillota
CAT
Met
>WENV170001448
AGFS01047274
235696
Bacillota
CCA
Trp
>WENV11101520
AGFS01047274
235696
Bacillota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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