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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11101429
AGFS01015072
411593
Gammaproteobacteria
CCC
Gly
>WENV170001357
AGFS01015072
411593
Gammaproteobacteria
CCC
Gly
>WENV11101805
AGFS01136275
23626
Gammaproteobacteria
TGA
Ser
>WENV170001733
AGFS01136275
23626
Gammaproteobacteria
TGA
Ser
>WENV11101670
AGFS01101911
235915
Gammaproteobacteria
TGT
Thr
>WENV170001598
AGFS01101911
235915
Gammaproteobacteria
TGT
Thr
>WENV11101746
AGFS01121235
338240
Gammaproteobacteria
>WENV170001674
AGFS01121235
338240
Gammaproteobacteria
>WENV11101656
AGFS01096388
51143
Gammaproteobacteria
TGA
Ser
>WENV170001584
AGFS01096388
51143
Gammaproteobacteria
TGA
Ser
>WENV11101769
AGFS01129246
16446
Gammaproteobacteria
GCT
Ser
>WENV170001697
AGFS01129246
16446
Gammaproteobacteria
GCT
Ser
>WENV170001573
AGFS01092909
279806
Gammaproteobacteria
TGT
Thr
>WENV11101645
AGFS01092909
279806
Gammaproteobacteria
TGT
Thr
>WENV11101721
AGFS01115128
292044
Gammaproteobacteria
GTG
His
>WENV11101408
AGFS01005919
292044
Gammaproteobacteria
GTG
His
>WENV170001408
AGFS01032763
64633
Gammaproteobacteria
TAA
Leu
>WENV11101480
AGFS01032763
64633
Gammaproteobacteria
TAA
Leu
>WENV170001675
AGFS01121235
236050
Gammaproteobacteria
TGT
Thr
>WENV11101747
AGFS01121235
236050
Gammaproteobacteria
TGT
Thr
>WENV170001353
AGFS01013296
412407
Gammaproteobacteria
CTG
Gln
>WENV11101425
AGFS01013296
412407
Gammaproteobacteria
CTG
Gln
>WENV170001634
AGFS01111724
236131
Gammaproteobacteria
GAA
Phe
>WENV170001442
AGFS01046487
236131
Gammaproteobacteria
GAA
Phe
>WENV11101706
AGFS01111724
236131
Gammaproteobacteria
GAA
Phe
>WENV11101514
AGFS01046487
236131
Gammaproteobacteria
GAA
Phe
>WENV170001461
AGFS01052495
238307
Gammaproteobacteria
GAA
Phe
>WENV11101533
AGFS01052495
238307
Gammaproteobacteria
GAA
Phe
>WENV170001555
AGFS01084910
235314
Gammaproteobacteria
CGT
Thr
>WENV11101627
AGFS01084910
235314
Gammaproteobacteria
CGT
Thr
>WENV170001687
AGFS01123776
59391
Gammaproteobacteria
>WENV11101759
AGFS01123776
59391
Gammaproteobacteria
>WENV170001484
AGFS01061237
191498
Gammaproteobacteria
CAT
Met
>WENV11101556
AGFS01061237
191498
Gammaproteobacteria
CAT
Met
>WENV170001765
AGFS01150188
80618
Gammaproteobacteria
TAA
Leu
>WENV11101837
AGFS01150188
80618
Gammaproteobacteria
TAA
Leu
>WENV170001537
AGFS01078399
411725
Gammaproteobacteria
CCC
Gly
>WENV11101609
AGFS01078399
411725
Gammaproteobacteria
CCC
Gly
>WENV170001418
AGFS01038101
173286
Gammaproteobacteria
GGG
Pro
>WENV11101490
AGFS01038101
173286
Gammaproteobacteria
GGG
Pro
>WENV170001790
AGFS01162904
173221
Gammaproteobacteria
CAT
Met
>WENV170001380
AGFS01024214
173221
Gammaproteobacteria
CAT
Met
>WENV11101862
AGFS01162904
173221
Gammaproteobacteria
CAT
Met
>WENV11101452
AGFS01024214
173221
Gammaproteobacteria
CAT
Met
>WENV11101847
AGFS01156642
199276
Gammaproteobacteria
TCT
Arg
>WENV170001775
AGFS01156642
199276
Gammaproteobacteria
TCT
Arg
>WENV170001730
AGFS01135800
147595
Gammaproteobacteria
CCT
Arg
>WENV11101802
AGFS01135800
147595
Gammaproteobacteria
CCT
Arg
>WENV11101580
AGFS01064926
156545
Gammaproteobacteria
TCT
Arg
>WENV170001441
AGFS01046446
145522
Gammaproteobacteria
CCG
Arg
>WENV11101513
AGFS01046446
145522
Gammaproteobacteria
CCG
Arg
>WENV170001678
AGFS01122227
295745
Gammaproteobacteria
TGT
Thr
>WENV11101750
AGFS01122227
295745
Gammaproteobacteria
TGT
Thr
>WENV170001347
AGFS01010011
16840
Gammaproteobacteria
GGA
Ser
>WENV11101419
AGFS01010011
16840
Gammaproteobacteria
GGA
Ser
>WENV170001481
AGFS01060686
95603
Gammaproteobacteria
TAG
Leu
>WENV11101553
AGFS01060686
95603
Gammaproteobacteria
TAG
Leu
>WENV170001334
AGFS01004345
237467
Gammaproteobacteria
TCT
Arg
>WENV11101406
AGFS01004345
237467
Gammaproteobacteria
TCT
Arg
>WENV11101691
AGFS01106592
145334
Gammaproteobacteria
CCG
Arg
>WENV11101549
AGFS01057973
145334
Gammaproteobacteria
CCG
Arg
>WENV170001619
AGFS01106592
145334
Gammaproteobacteria
CCG
Arg
>WENV170001477
AGFS01057973
145334
Gammaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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