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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170004902
AJWY01012531
235102
Bacteroidota
CGT
Thr
>WENV170004821
AJWY01005078
243025
Bacteroidota
CAT
Met
>WENV170004849
AJWY01008373
97336
Bacteroidota
CAG
Leu
>WENV170004852
AJWY01008619
343138
Bacteroidota
CCT
Arg
>WENV170004797
AJWY01003193
17323
Bacteroidota
GGA
Ser
>WENV170004872
AJWY01010483
413663
Bacteroidota
CTG
Gln
>WENV170004845
AJWY01007802
412479
Bacteroidota
TTG
Gln
>WENV170004842
AJWY01007523
344692
Bacteroidota
GGT
Thr
>WENV170004792
AJWY01002859
344692
Bacteroidota
GGT
Thr
>WENV170004909
AJWY01013499
154643
Bacteroidota
CAT
Met
>WENV170004871
AJWY01010433
95875
Bacteroidota
TAG
Leu
>WENV170004826
AJWY01005631
353927
Bacteroidota
TTC
Glu
>WENV170004879
AJWY01011155
313363
Bacteroidota
GAA
Phe
>WENV170004802
AJWY01003326
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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