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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170005631
AMCI01009200
257966
Bacillota
CCA
Trp
>WENV170005584
AMCI01008082
257969
Bacillota
TAC
Val
>WENV170005414
AMCI01003994
167053
Bacillota
GTG
His
>WENV170005553
AMCI01007507
159872
Bacillota
GAT
Ile
>WENV170005640
AMCI01009382
20569
Bacillota
GCT
Ser
>WENV170005635
AMCI01009308
259255
Bacillota
TTT
Lys
>WENV170005558
AMCI01007558
285420
Bacillota
TGT
Thr
>WENV170005437
AMCI01004317
162688
Bacillota
GAT
Ile
>WENV170005534
AMCI01006948
47790
Bacillota
TGA
Ser
>WENV170005415
AMCI01003994
376963
Bacillota
TTG
Gln
>WENV170005474
AMCI01005374
30306
Bacillota
>WENV170005557
AMCI01007558
288015
Bacillota
TAC
Val
>WENV170005331
AMCI01002328
27565
Bacillota
TAA
Leu
>WENV170005263
AMCI01001199
296620
Bacillota
GAA
Phe
>WENV170005262
AMCI01001199
172620
Bacillota
GTC
Asp
>WENV170005597
AMCI01008248
41233
Bacillota
TGA
Ser
>WENV170005599
AMCI01008248
217121
Bacillota
TGG
Pro
>WENV170005596
AMCI01008248
285475
Bacillota
TTT
Lys
>WENV170005413
AMCI01003994
237000
Bacillota
TCT
Arg
>WENV170005622
AMCI01008826
159345
Bacillota
GAT
Ile
>WENV170005254
AMCI01000961
20603
Bacillota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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