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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
7 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170012985
ASRQ01001572
264987
Alphaproteobacteria
CCA
Trp
>WENV170012994
ASRQ01003529
405332
Alphaproteobacteria
GCC
Gly
>WENV170012960
ASRQ01000302
161004
Alphaproteobacteria
>WENV170012958
ASRQ01000294
375074
Alphaproteobacteria
GGT
Thr
>WENV170012973
ASRQ01000647
371034
Alphaproteobacteria
GAC
Val
>WENV170012974
ASRQ01000768
75231
Alphaproteobacteria
CAG
Leu
>WENV170012993
ASRQ01003371
449052
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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