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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170014571
AYRH01014425
257087
Gammaproteobacteria
GTG
His
>WENV170014576
AYRH01016039
67693
Gammaproteobacteria
CAG
Leu
>WENV170014601
AYRH01032773
161517
Gammaproteobacteria
CAT
Met
>WENV170014551
AYRH01006094
260453
Gammaproteobacteria
GTT
Asn
>WENV170014561
AYRH01009337
105040
Gammaproteobacteria
TAG
Leu
>WENV170014540
AYRH01001986
126541
Gammaproteobacteria
GTA
Tyr
>WENV170014598
AYRH01029300
258493
Gammaproteobacteria
GGC
Ala
>WENV170014560
AYRH01009337
160850
Gammaproteobacteria
CAT
Met
>WENV170014595
AYRH01026585
257090
Gammaproteobacteria
GTT
Asn
>WENV170014587
AYRH01020484
275659
Gammaproteobacteria
GCC
Gly
>WENV170014554
AYRH01006798
175702
Gammaproteobacteria
GAC
Val
>WENV170014580
AYRH01017723
279924
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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