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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV086593
BABG01000160
258780
Bacteroidota
>WENV086775
BABG01007653
272161
Bacteroidota
CGT
Thr
>WENV086650
BABG01001570
144955
Bacteroidota
GGG
Pro
>WENV086715
BABG01004517
144955
Bacteroidota
GGG
Pro
>WENV086596
BABG01000190
259292
Bacteroidota
CGT
Thr
>WENV086688
BABG01003359
76307
Bacteroidota
GAG
Leu
>WENV086929
BABG01025927
449113
Bacteroidota
GCA
Cys
>WENV086589
BABG01000129
261339
Bacteroidota
CCA
Trp
>WENV086592
BABG01000129
105937
Bacteroidota
GTA
Tyr
>WENV086588
BABG01000129
261338
Bacteroidota
GTT
Asn
>WENV086849
BABG01013537
374505
Bacteroidota
CTC
Glu
>WENV086923
BABG01024560
374505
Bacteroidota
CTC
Glu
>WENV086622
BABG01000605
124700
Bacteroidota
>WENV086765
BABG01007131
124700
Bacteroidota
>WENV086768
BABG01007131
124700
Bacteroidota
>WENV086680
BABG01002886
370133
Bacteroidota
CCG
Arg
>WENV086661
BABG01002333
105470
Bacteroidota
TAG
Leu
>WENV086900
BABG01021283
52815
Bacteroidota
TAA
Leu
>WENV086931
BABG01026580
52815
Bacteroidota
TAA
Leu
>WENV086544
BABG01000021
259289
Bacteroidota
CTC
Glu
>WENV086623
BABG01000605
65114
Bacteroidota
GAG
Leu
>WENV086767
BABG01007131
65114
Bacteroidota
GAG
Leu
>WENV086634
BABG01000916
448605
Bacteroidota
CTG
Gln
>WENV086590
BABG01000129
449089
Bacteroidota
TTG
Gln
>WENV086585
BABG01000109
54039
Bacteroidota
TGA
Ser
>WENV086632
BABG01000792
54039
Bacteroidota
TGA
Ser
>WENV086685
BABG01003349
54039
Bacteroidota
TGA
Ser
>WENV086936
BABG01027936
54039
Bacteroidota
TGA
Ser
>WENV086949
BABG01029881
54039
Bacteroidota
TGA
Ser
>WENV086587
BABG01000129
261337
Bacteroidota
>WENV086756
BABG01007030
160458
Bacteroidota
>WENV086760
BABG01007118
193541
Bacteroidota
GTT
Asn
>WENV086725
BABG01005292
160459
Bacteroidota
GGC
Ala
>WENV086841
BABG01013197
41432
Bacteroidota
TAA
Leu
>WENV086591
BABG01000129
371225
Bacteroidota
TTC
Glu
>WENV086666
BABG01002497
370351
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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