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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170122564
CENN01109722
387387
Cyanobacteriota
GAC
Val
>WENV170121837
CENN01022555
366531
Cyanobacteriota
TTG
Gln
>WENV170121654
CENN01006425
145761
Cyanobacteriota
GTC
Asp
>WENV170122352
CENN01073246
145761
Cyanobacteriota
GTC
Asp
>WENV170121908
CENN01029636
306125
Cyanobacteriota
GTG
His
>WENV170122172
CENN01052368
96363
Cyanobacteriota
TAG
Leu
>WENV170122143
CENN01050260
25356
Cyanobacteriota
GGA
Ser
>WENV170122819
CENN01194037
338782
Cyanobacteriota
GTT
Asn
>WENV170121599
CENN01002471
149253
Cyanobacteriota
ACG
Arg
>WENV170121979
CENN01035613
245150
Cyanobacteriota
GTG
His
>WENV170122655
CENN01151926
339688
Cyanobacteriota
GAC
Val
>WENV170122300
CENN01067029
252089
Cyanobacteriota
GTG
His
>WENV170122223
CENN01057871
148812
Cyanobacteriota
CGG
Pro
>WENV170121711
CENN01010798
240100
Cyanobacteriota
CAT
Met
>WENV170122079
CENN01045032
188100
Cyanobacteriota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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