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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170150038
CEOC01078306
97610
Bacteroidota
GTA
Tyr
>WENV170149794
CEOC01056480
127458
Bacteroidota
GAC
Val
>WENV170150825
CEOC01160901
270933
Bacteroidota
CAT
Met
>WENV170149151
CEOC01005491
241469
Bacteroidota
GAA
Phe
>WENV170149776
CEOC01054382
37569
Bacteroidota
TAA
Leu
>WENV170151279
CEOC01280813
273242
Bacteroidota
CCA
Trp
>WENV170149963
CEOC01070233
127414
Bacteroidota
TGG
Pro
>WENV170149231
CEOC01011925
127414
Bacteroidota
TGG
Pro
>WENV170149902
CEOC01066327
238764
Bacteroidota
>WENV170149668
CEOC01047121
242524
Bacteroidota
GCC
Gly
>WENV170150912
CEOC01166151
44938
Bacteroidota
TGA
Ser
>WENV170149817
CEOC01057829
44938
Bacteroidota
TGA
Ser
>WENV170149781
CEOC01055174
17987
Bacteroidota
GGA
Ser
>WENV170150709
CEOC01151588
97383
Bacteroidota
CAA
Leu
>WENV170149096
CEOC01001182
80676
Bacteroidota
GTA
Tyr
>WENV170150134
CEOC01088969
150454
Bacteroidota
TGT
Thr
>WENV170150037
CEOC01078306
150454
Bacteroidota
TGT
Thr
>WENV170149351
CEOC01022973
246641
Bacteroidota
GAA
Phe
>WENV170149441
CEOC01029075
240684
Bacteroidota
TTT
Lys
>WENV170150983
CEOC01168176
165044
Bacteroidota
GTG
His
>WENV170149127
CEOC01003693
145555
Bacteroidota
GTC
Asp
>WENV170150385
CEOC01117421
48914
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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