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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170161910
CEOL01033856
256881
Gammaproteobacteria
GTG
His
>WENV170161785
CEOL01010687
18367
Gammaproteobacteria
GCT
Ser
>WENV170161784
CEOL01010686
179231
Gammaproteobacteria
CCT
Arg
>WENV170161876
CEOL01028530
21793
Gammaproteobacteria
GGA
Ser
>WENV170161961
CEOL01059875
285013
Gammaproteobacteria
GGT
Thr
>WENV170162036
CEOL01087648
448070
Gammaproteobacteria
GCA
Cys
>WENV170161911
CEOL01033856
106574
Gammaproteobacteria
TAG
Leu
>WENV170161786
CEOL01010687
214281
Gammaproteobacteria
ACG
Arg
>WENV170161787
CEOL01010687
214281
Gammaproteobacteria
ACG
Arg
>WENV170161788
CEOL01010687
214281
Gammaproteobacteria
ACG
Arg
>WENV170161919
CEOL01034308
290512
Gammaproteobacteria
TGT
Thr
>WENV170162041
CEOL01089002
67081
Gammaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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