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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170166474
CEOO01067471
165001
Bacteroidota
GTT
Asn
>WENV170165754
CEOO01006010
59355
Bacteroidota
GCT
Ser
>WENV170165964
CEOO01021767
60611
Bacteroidota
GCT
Ser
>WENV170166217
CEOO01042861
241469
Bacteroidota
GAA
Phe
>WENV170166470
CEOO01066882
127414
Bacteroidota
TGG
Pro
>WENV170166598
CEOO01081503
127414
Bacteroidota
TGG
Pro
>WENV170166288
CEOO01049077
242524
Bacteroidota
GCC
Gly
>WENV170166174
CEOO01040330
17987
Bacteroidota
GGA
Ser
>WENV170165971
CEOO01022317
17496
Bacteroidota
GGA
Ser
>WENV170166841
CEOO01103619
97383
Bacteroidota
CAA
Leu
>WENV170166755
CEOO01097340
246641
Bacteroidota
GAA
Phe
>WENV170166008
CEOO01026164
240684
Bacteroidota
TTT
Lys
>WENV170166131
CEOO01036663
240901
Bacteroidota
TTT
Lys
>WENV170166119
CEOO01035805
240901
Bacteroidota
TTT
Lys
>WENV170165893
CEOO01016146
240901
Bacteroidota
TTT
Lys
>WENV170166347
CEOO01053801
145507
Bacteroidota
TCT
Arg
>WENV170166461
CEOO01066134
48382
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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