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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170191780
CEPD01061219
308806
Bacteroidota
TCC
Gly
>WENV170191444
CEPD01020085
154388
Bacteroidota
GTG
His
>WENV170191349
CEPD01010845
338625
Bacteroidota
TTC
Glu
>WENV170191350
CEPD01010845
338625
Bacteroidota
TTC
Glu
>WENV170191672
CEPD01047139
236125
Bacteroidota
GAA
Phe
>WENV170191442
CEPD01019845
364423
Bacteroidota
GGT
Thr
>WENV170191659
CEPD01045822
274593
Bacteroidota
TTG
Gln
>WENV170191215
CEPD01000117
17987
Bacteroidota
GGA
Ser
>WENV170191999
CEPD01111375
160686
Bacteroidota
CAT
Met
>WENV170191439
CEPD01019845
197220
Bacteroidota
TGT
Thr
>WENV170191781
CEPD01061219
342872
Bacteroidota
GGT
Thr
>WENV170192043
CEPD01122463
165044
Bacteroidota
GTG
His
>WENV170191310
CEPD01007335
21340
Bacteroidota
GGA
Ser
>WENV170191406
CEPD01016389
240901
Bacteroidota
TTT
Lys
>WENV170192008
CEPD01113482
193473
Bacteroidota
GTC
Asp
>WENV170191254
CEPD01002949
152405
Bacteroidota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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