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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170191254
CEPD01002949
213847
Bacteroidota
GTT
Asn
>WENV170191781
CEPD01061219
370082
Bacteroidota
GGT
Thr
>WENV170191999
CEPD01111375
170034
Bacteroidota
>WENV170191671
CEPD01046936
139484
Bacteroidota
TAC
Val
>WENV170191789
CEPD01063101
169559
Bacteroidota
GGG
Pro
>WENV170191726
CEPD01054798
160349
Bacteroidota
GTG
His
>WENV170191439
CEPD01019845
200621
Bacteroidota
TGT
Thr
>WENV170191742
CEPD01056789
65096
Bacteroidota
TAA
Leu
>WENV170191678
CEPD01047760
321470
Bacteroidota
GAA
Phe
>WENV170191602
CEPD01038460
158981
Bacteroidota
GGC
Ala
>WENV170191217
CEPD01000209
69028
Bacteroidota
GAG
Leu
>WENV170191310
CEPD01007335
22472
Bacteroidota
GGA
Ser
>WENV170192004
CEPD01112114
89188
Bacteroidota
GTA
Tyr
>WENV170191215
CEPD01000117
23145
Bacteroidota
GGA
Ser
>WENV170191672
CEPD01047139
311172
Bacteroidota
GAA
Phe
>WENV170191659
CEPD01045822
325477
Bacteroidota
TTG
Gln
>WENV170192043
CEPD01122463
169560
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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