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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170198235
CEPK01298985
171935
Gammaproteobacteria
ACG
Arg
>WENV170197783
CEPK01169051
99112
Gammaproteobacteria
TAG
Leu
>WENV170196032
CEPK01017955
185163
Gammaproteobacteria
ACG
Arg
>WENV170196033
CEPK01017955
185163
Gammaproteobacteria
ACG
Arg
>WENV170197730
CEPK01165904
149036
Gammaproteobacteria
CCA
Trp
>WENV170197925
CEPK01179352
149036
Gammaproteobacteria
CCA
Trp
>WENV170196341
CEPK01037983
412799
Gammaproteobacteria
GCA
Cys
>WENV170196175
CEPK01028934
340801
Gammaproteobacteria
CCT
Arg
>WENV170197899
CEPK01177591
278046
Gammaproteobacteria
TGT
Thr
>WENV170197272
CEPK01117401
278046
Gammaproteobacteria
TGT
Thr
>WENV170197275
CEPK01117401
240084
Gammaproteobacteria
GGT
Thr
>WENV170196031
CEPK01017955
10767
Gammaproteobacteria
GCT
Ser
>WENV170195857
CEPK01002584
341782
Gammaproteobacteria
TTG
Gln
>WENV170196006
CEPK01015471
151889
Gammaproteobacteria
CAT
Met
>WENV170197921
CEPK01179018
154796
Gammaproteobacteria
TCT
Arg
>WENV170197126
CEPK01103109
243485
Gammaproteobacteria
TGT
Thr
>WENV170196220
CEPK01031036
59658
Gammaproteobacteria
CAA
Leu
>WENV170198282
CEPK01315779
247088
Gammaproteobacteria
CCA
Trp
>WENV170197995
CEPK01182661
149037
Gammaproteobacteria
GAC
Val
>WENV170195942
CEPK01010252
45411
Gammaproteobacteria
GGA
Ser
>WENV170198174
CEPK01271625
412463
Gammaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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