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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170226629
CEQF01001623
152405
Bacteroidota
GTT
Asn
>WENV170226719
CEQF01009783
139286
Bacteroidota
TGG
Pro
>WENV170227188
CEQF01054371
236125
Bacteroidota
GAA
Phe
>WENV170227392
CEQF01079330
320640
Bacteroidota
TTG
Gln
>WENV170227596
CEQF01108851
153768
Bacteroidota
TGC
Ala
>WENV170227846
CEQF01143314
238764
Bacteroidota
>WENV170227887
CEQF01148548
127458
Bacteroidota
GAC
Val
>WENV170227970
CEQF01155747
193473
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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