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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170255058
CEQW01048537
249887
Gammaproteobacteria
GGT
Thr
>WENV170254733
CEQW01016887
268606
Gammaproteobacteria
TGT
Thr
>WENV170255499
CEQW01129990
160030
Gammaproteobacteria
GGG
Pro
>WENV170255031
CEQW01046708
269248
Gammaproteobacteria
CCA
Trp
>WENV170254796
CEQW01022989
149036
Gammaproteobacteria
CCA
Trp
>WENV170255294
CEQW01065823
146791
Gammaproteobacteria
GAC
Val
>WENV170255321
CEQW01067398
148148
Gammaproteobacteria
GAC
Val
>WENV170255464
CEQW01124176
145261
Gammaproteobacteria
CAT
Met
>WENV170254563
CEQW01007021
412799
Gammaproteobacteria
GCA
Cys
>WENV170255235
CEQW01063247
243485
Gammaproteobacteria
TGT
Thr
>WENV170254555
CEQW01006585
59658
Gammaproteobacteria
CAA
Leu
>WENV170254968
CEQW01041347
150183
Gammaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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