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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170274202
CERM01003951
387387
Cyanobacteriota
GAC
Val
>WENV170274415
CERM01016084
373624
Cyanobacteriota
TTG
Gln
>WENV170275325
CERM01080141
23409
Cyanobacteriota
GGA
Ser
>WENV170275742
CERM01199120
245150
Cyanobacteriota
GTG
His
>WENV170274894
CERM01050046
153717
Cyanobacteriota
CAT
Met
>WENV170274187
CERM01003493
11030
Cyanobacteriota
GCT
Ser
>WENV170275720
CERM01195670
275577
Cyanobacteriota
TGC
Ala
>WENV170275198
CERM01072665
147238
Cyanobacteriota
CCG
Arg
>WENV170274594
CERM01028066
275071
Cyanobacteriota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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