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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170297826
CESF01012505
323812
Cyanobacteriota
GGC
Ala
>WENV170297926
CESF01023615
323812
Cyanobacteriota
GGC
Ala
>WENV170298098
CESF01047895
400868
Cyanobacteriota
TTG
Gln
>WENV170298146
CESF01054832
400868
Cyanobacteriota
TTG
Gln
>WENV170298182
CESF01062508
400868
Cyanobacteriota
TTG
Gln
>WENV170297857
CESF01015377
29220
Cyanobacteriota
CGA
Ser
>WENV170298708
CESF01217894
105816
Cyanobacteriota
CAG
Leu
>WENV170297902
CESF01021390
160107
Cyanobacteriota
CAT
Met
>WENV170298164
CESF01058629
258993
Cyanobacteriota
CCA
Trp
>WENV170297750
CESF01000526
161710
Cyanobacteriota
ACG
Arg
>WENV170298539
CESF01135274
105401
Cyanobacteriota
TAG
Leu
>WENV170297844
CESF01013740
369944
Cyanobacteriota
GAC
Val
>WENV170298130
CESF01052124
119315
Cyanobacteriota
GAG
Leu
>WENV170298282
CESF01083665
258998
Cyanobacteriota
CGT
Thr
>WENV170298019
CESF01036673
284834
Cyanobacteriota
CGC
Ala
>WENV170298379
CESF01105654
369938
Cyanobacteriota
GTT
Asn
>WENV170298372
CESF01104391
267587
Cyanobacteriota
>WENV170297863
CESF01015986
105817
Cyanobacteriota
CAA
Leu
>WENV170298213
CESF01068715
370922
Cyanobacteriota
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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