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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170310616
CESM01054388
252328
Alphaproteobacteria
TTT
Lys
>WENV170310823
CESM01075417
252328
Alphaproteobacteria
TTT
Lys
>WENV170310888
CESM01082020
252328
Alphaproteobacteria
TTT
Lys
>WENV170310909
CESM01084039
252328
Alphaproteobacteria
TTT
Lys
>WENV170310641
CESM01057024
113700
Alphaproteobacteria
>WENV170311805
CESM01187651
23468
Alphaproteobacteria
GCT
Ser
>WENV170311359
CESM01133176
338282
Alphaproteobacteria
GTT
Asn
>WENV170311881
CESM01197226
338282
Alphaproteobacteria
GTT
Asn
>WENV170309974
CESM01004206
339290
Alphaproteobacteria
GGT
Thr
>WENV170310266
CESM01025280
339290
Alphaproteobacteria
GGT
Thr
>WENV170310155
CESM01016939
339454
Alphaproteobacteria
>WENV170312560
CESM01315710
147879
Alphaproteobacteria
TGG
Pro
>WENV170310884
CESM01081591
237740
Alphaproteobacteria
TTT
Lys
>WENV170310093
CESM01011868
252148
Alphaproteobacteria
TGT
Thr
>WENV170310150
CESM01016344
167926
Alphaproteobacteria
CAT
Met
>WENV170310433
CESM01039495
254522
Alphaproteobacteria
GAA
Phe
>WENV170309958
CESM01003143
242540
Alphaproteobacteria
TGC
Ala
>WENV170311928
CESM01203463
348781
Alphaproteobacteria
GAA
Phe
>WENV170310937
CESM01086265
160158
Alphaproteobacteria
GAT
Ile
>WENV170311200
CESM01115700
235430
Alphaproteobacteria
TTT
Lys
>WENV170311342
CESM01131420
152248
Alphaproteobacteria
TGG
Pro
>WENV170311264
CESM01123798
152248
Alphaproteobacteria
TGG
Pro
>WENV170312563
CESM01317282
412424
Alphaproteobacteria
TCC
Gly
>WENV170310201
CESM01020300
412424
Alphaproteobacteria
TCC
Gly
>WENV170310489
CESM01044605
342846
Alphaproteobacteria
GAC
Val
>WENV170312220
CESM01228716
351007
Alphaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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