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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170317830
CESP01262786
235837
Gammaproteobacteria
GTT
Asn
>WENV170317487
CESP01160177
417812
Gammaproteobacteria
GCA
Cys
>WENV170316609
CESP01061932
244202
Gammaproteobacteria
TTT
Lys
>WENV170317361
CESP01150149
96672
Gammaproteobacteria
TAG
Leu
>WENV170317179
CESP01124273
149036
Gammaproteobacteria
CCA
Trp
>WENV170316693
CESP01070442
174801
Gammaproteobacteria
TGG
Pro
>WENV170316389
CESP01037250
241230
Gammaproteobacteria
GAA
Phe
>WENV170316681
CESP01069727
260238
Gammaproteobacteria
>WENV170317621
CESP01165861
252289
Gammaproteobacteria
TTT
Lys
>WENV170317843
CESP01265899
165387
Gammaproteobacteria
CCT
Arg
>WENV170317685
CESP01177855
59658
Gammaproteobacteria
CAA
Leu
>WENV170317300
CESP01141152
237421
Gammaproteobacteria
TGT
Thr
>WENV170316489
CESP01047458
163882
Gammaproteobacteria
GAC
Val
>WENV170317819
CESP01257667
149037
Gammaproteobacteria
GAC
Val
>WENV170317618
CESP01165844
411735
Gammaproteobacteria
GCA
Cys
>WENV170317177
CESP01123615
266766
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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