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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.411735 (6 seq.)
>W1910740557
MHTP01000008
Unclassified
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_01_FULL_45_20 [MHTP]
9909
9983
+
Lys
CTT
[ENA]
¡û
>W1910740747
MHTV01000015
Unclassified
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_02_FULL_45_25 [MHTV]
9896
9970
+
Lys
CTT
[ENA]
¡û
>W1910741021
MHUD01000033
Unclassified
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_12_FULL_45_9 [MHUD]
10146
10220
+
Lys
CTT
[ENA]
¡û
>W2010873987
MHTP01000008
Unclassified
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_01_FULL_45_20 [MHTP]
9909
9983
+
Lys
CTT
[ENA]
¡û
>W2010874177
MHTV01000015
Unclassified
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_02_FULL_45_25 [MHTV]
9896
9970
+
Lys
CTT
[ENA]
¡û
>W2010874451
MHUD01000033
Unclassified
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_12_FULL_45_9 [MHUD]
10146
10220
+
Lys
CTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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