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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170343856
CETE01044730
165001
Bacteroidota
GTT
Asn
>WENV170344742
CETE01132257
165001
Bacteroidota
GTT
Asn
>WENV170343474
CETE01012561
139286
Bacteroidota
TGG
Pro
>WENV170343488
CETE01013505
139286
Bacteroidota
TGG
Pro
>WENV170344889
CETE01147315
139286
Bacteroidota
TGG
Pro
>WENV170343797
CETE01038253
306609
Bacteroidota
GAA
Phe
>WENV170344580
CETE01118602
306609
Bacteroidota
GAA
Phe
>WENV170344791
CETE01138219
306609
Bacteroidota
GAA
Phe
>WENV170344854
CETE01144792
306609
Bacteroidota
GAA
Phe
>WENV170343429
CETE01008850
308806
Bacteroidota
TCC
Gly
>WENV170344980
CETE01152472
308806
Bacteroidota
TCC
Gly
>WENV170344920
CETE01150167
294483
Bacteroidota
TTT
Lys
>WENV170345294
CETE01263273
387331
Bacteroidota
CCT
Arg
>WENV170344687
CETE01126722
430187
Bacteroidota
GCA
Cys
>WENV170343421
CETE01008424
241019
Bacteroidota
CAT
Met
>WENV170344670
CETE01126119
99288
Bacteroidota
TAG
Leu
>WENV170343405
CETE01006695
238872
Bacteroidota
TTT
Lys
>WENV170344313
CETE01089861
145683
Bacteroidota
TGC
Ala
>WENV170345173
CETE01217839
127458
Bacteroidota
GAC
Val
>WENV170345273
CETE01258177
126641
Bacteroidota
TAC
Val
>WENV170344485
CETE01108559
238764
Bacteroidota
>WENV170344180
CETE01074488
190649
Bacteroidota
GTT
Asn
>WENV170344429
CETE01103636
44938
Bacteroidota
TGA
Ser
>WENV170344298
CETE01088678
44938
Bacteroidota
TGA
Ser
>WENV170343771
CETE01036437
44938
Bacteroidota
TGA
Ser
>WENV170344524
CETE01112191
17496
Bacteroidota
GGA
Ser
>WENV170344370
CETE01097029
17496
Bacteroidota
GGA
Ser
>WENV170343744
CETE01033429
150454
Bacteroidota
TGT
Thr
>WENV170343674
CETE01027522
113694
Bacteroidota
GTA
Tyr
>WENV170344984
CETE01152572
21340
Bacteroidota
GGA
Ser
>WENV170343625
CETE01023365
185921
Bacteroidota
GTC
Asp
>WENV170344891
CETE01147609
145507
Bacteroidota
TCT
Arg
>WENV170344911
CETE01149713
360629
Bacteroidota
GGT
Thr
>WENV170344328
CETE01091193
193473
Bacteroidota
GTC
Asp
>WENV170343376
CETE01003527
193473
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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