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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170355929
CETI01482061
149035
Gammaproteobacteria
CCG
Arg
>WENV170355958
CETI01490571
145260
Gammaproteobacteria
CAT
Met
>WENV170355892
CETI01468960
160030
Gammaproteobacteria
GGG
Pro
>WENV170353699
CETI01041478
240642
Gammaproteobacteria
GTT
Asn
>WENV170355535
CETI01245930
149036
Gammaproteobacteria
CCA
Trp
>WENV170355523
CETI01245674
340801
Gammaproteobacteria
CCT
Arg
>WENV170353651
CETI01036911
240084
Gammaproteobacteria
GGT
Thr
>WENV170353650
CETI01036911
412476
Gammaproteobacteria
TCC
Gly
>WENV170354098
CETI01082387
173040
Gammaproteobacteria
GAC
Val
>WENV170355883
CETI01467236
250885
Gammaproteobacteria
TGC
Ala
>WENV170354580
CETI01142048
151889
Gammaproteobacteria
CAT
Met
>WENV170354183
CETI01092034
128930
Gammaproteobacteria
GTC
Asp
>WENV170353836
CETI01055726
59658
Gammaproteobacteria
CAA
Leu
>WENV170355985
CETI01499238
149037
Gammaproteobacteria
GAC
Val
>WENV170355955
CETI01490029
237159
Gammaproteobacteria
GTG
His
>WENV170355124
CETI01211972
45411
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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