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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170393164
CEUB01133307
109034
Cyanobacteriota
GAG
Leu
>WENV170392592
CEUB01054530
161711
Cyanobacteriota
GTC
Asp
>WENV170392290
CEUB01021305
12337
Cyanobacteriota
GCT
Ser
>WENV170392591
CEUB01054530
258993
Cyanobacteriota
CCA
Trp
>WENV170392999
CEUB01110776
258996
Cyanobacteriota
GTG
His
>WENV170392949
CEUB01103798
369944
Cyanobacteriota
GAC
Val
>WENV170392327
CEUB01025894
277049
Cyanobacteriota
GAA
Phe
>WENV170392401
CEUB01034941
260659
Cyanobacteriota
GGC
Ala
>WENV170392064
CEUB01000470
26568
Cyanobacteriota
TAA
Leu
>WENV170392456
CEUB01040952
118386
Cyanobacteriota
AAG
Leu
>WENV170393015
CEUB01112831
41374
Cyanobacteriota
TAA
Leu
>WENV170392934
CEUB01102591
161765
Cyanobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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