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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170408971
CEUI01120156
65498
Bacteroidota
CAA
Leu
>WENV170409031
CEUI01140079
160614
Bacteroidota
GTT
Asn
>WENV170408556
CEUI01037346
369302
Bacteroidota
TTC
Glu
>WENV170408827
CEUI01064131
302353
Bacteroidota
TTG
Gln
>WENV170408733
CEUI01056379
159110
Bacteroidota
TCT
Arg
>WENV170408913
CEUI01095778
160349
Bacteroidota
GTG
His
>WENV170408923
CEUI01100297
88702
Bacteroidota
GTA
Tyr
>WENV170408982
CEUI01125135
159105
Bacteroidota
TCG
Arg
>WENV170409044
CEUI01142125
269121
Bacteroidota
TCC
Gly
>WENV170408734
CEUI01056379
257829
Bacteroidota
TTT
Lys
>WENV170408386
CEUI01022089
259269
Bacteroidota
GAA
Phe
>WENV170408731
CEUI01056379
11985
Bacteroidota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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