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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170467304
CEVE01129324
174334
Gammaproteobacteria
>WENV170467567
CEVE01173077
170011
Gammaproteobacteria
CCG
Arg
>WENV170466131
CEVE01023417
309075
Gammaproteobacteria
GTT
Asn
>WENV170466178
CEVE01027384
451765
Gammaproteobacteria
GCA
Cys
>WENV170466790
CEVE01083828
451765
Gammaproteobacteria
GCA
Cys
>WENV170467574
CEVE01178942
198668
Gammaproteobacteria
>WENV170467377
CEVE01132676
257463
Gammaproteobacteria
TTT
Lys
>WENV170466554
CEVE01063238
319314
Gammaproteobacteria
TGT
Thr
>WENV170466540
CEVE01062162
67015
Gammaproteobacteria
CAG
Leu
>WENV170465969
CEVE01014208
65736
Gammaproteobacteria
TAA
Leu
>WENV170466353
CEVE01042641
65736
Gammaproteobacteria
TAA
Leu
>WENV170466511
CEVE01059361
65736
Gammaproteobacteria
TAA
Leu
>WENV170466574
CEVE01065168
65736
Gammaproteobacteria
TAA
Leu
>WENV170467335
CEVE01131302
65736
Gammaproteobacteria
TAA
Leu
>WENV170467288
CEVE01128311
325641
Gammaproteobacteria
CCA
Trp
>WENV170467633
CEVE01211487
164285
Gammaproteobacteria
TCG
Arg
>WENV170466664
CEVE01072549
259140
Gammaproteobacteria
TGC
Ala
>WENV170465790
CEVE01000994
161327
Gammaproteobacteria
ACG
Arg
>WENV170466725
CEVE01078473
105812
Gammaproteobacteria
GTA
Tyr
>WENV170466944
CEVE01099754
105812
Gammaproteobacteria
GTA
Tyr
>WENV170466745
CEVE01080179
19518
Gammaproteobacteria
TGA
Ser
>WENV170465811
CEVE01002786
261154
Gammaproteobacteria
TGC
Ala
>WENV170466274
CEVE01036316
265381
Gammaproteobacteria
GTT
Asn
>WENV170467354
CEVE01131907
265381
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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