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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170467377
CEVE01132676
237967
Gammaproteobacteria
TTT
Lys
>WENV170466554
CEVE01063238
312287
Gammaproteobacteria
TGT
Thr
>WENV170467074
CEVE01113447
17426
Gammaproteobacteria
GCT
Ser
>WENV170466711
CEVE01076585
61925
Gammaproteobacteria
TAA
Leu
>WENV170465790
CEVE01000994
154268
Gammaproteobacteria
ACG
Arg
>WENV170466238
CEVE01032497
240642
Gammaproteobacteria
GTT
Asn
>WENV170466160
CEVE01025948
173040
Gammaproteobacteria
GAC
Val
>WENV170467776
CEVE01268806
341782
Gammaproteobacteria
TTG
Gln
>WENV170466178
CEVE01027384
412373
Gammaproteobacteria
GCA
Cys
>WENV170465811
CEVE01002786
250885
Gammaproteobacteria
TGC
Ala
>WENV170467522
CEVE01137630
243485
Gammaproteobacteria
TGT
Thr
>WENV170467359
CEVE01131979
237159
Gammaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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