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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170507914
CEVX01106483
98124
Gammaproteobacteria
GAG
Leu
>WENV170507612
CEVX01067957
312287
Gammaproteobacteria
TGT
Thr
>WENV170508694
CEVX01212393
238370
Gammaproteobacteria
TTT
Lys
>WENV170507146
CEVX01021233
145489
Gammaproteobacteria
GAT
Ile
>WENV170507812
CEVX01094139
61925
Gammaproteobacteria
TAA
Leu
>WENV170508472
CEVX01167556
241476
Gammaproteobacteria
TTT
Lys
>WENV170508311
CEVX01151671
153865
Gammaproteobacteria
CCG
Arg
>WENV170508781
CEVX01256199
236025
Gammaproteobacteria
TTG
Gln
>WENV170507147
CEVX01021233
236029
Gammaproteobacteria
TGC
Ala
>WENV170507000
CEVX01009934
173040
Gammaproteobacteria
GAC
Val
>WENV170508834
CEVX01278911
250885
Gammaproteobacteria
TGC
Ala
>WENV170508004
CEVX01117460
250885
Gammaproteobacteria
TGC
Ala
>WENV170508962
CEVX01315276
190809
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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