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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170540410
CWHB01000007
131075
Actinomycetota
TAA
Leu
>WENV170540432
CWHB01000011
369047
Actinomycetota
TTC
Glu
>WENV170540411
CWHB01000007
158979
Actinomycetota
CAA
Leu
>WENV170540412
CWHB01000007
176608
Actinomycetota
TGG
Pro
>WENV170540423
CWHB01000011
279109
Actinomycetota
CTC
Glu
>WENV170540448
CWHB01000027
288631
Actinomycetota
CCT
Arg
>WENV170540426
CWHB01000011
125238
Actinomycetota
TAG
Leu
>WENV170540434
CWHB01000011
162424
Actinomycetota
>WENV170540414
CWHB01000007
29101
Actinomycetota
GAG
Leu
>WENV170540418
CWHB01000010
162454
Actinomycetota
TCT
Arg
>WENV170540408
CWHB01000007
158695
Actinomycetota
ACG
Arg
>WENV170540409
CWHB01000007
158695
Actinomycetota
ACG
Arg
>WENV170540444
CWHB01000026
448092
Actinomycetota
TTG
Gln
>WENV170540421
CWHB01000011
43294
Actinomycetota
CGA
Ser
>WENV170540430
CWHB01000011
158694
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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