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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170548322
CXUD01001350
17707
Bacillota
GCT
Ser
>WENV170548305
CXUD01000806
147639
Bacillota
ACG
Arg
>WENV170548329
CXUD01001603
147639
Bacillota
ACG
Arg
>WENV170548298
CXUD01000240
243206
Bacillota
GTG
His
>WENV170548337
CXUD01001802
96498
Bacillota
TAG
Leu
>WENV170548317
CXUD01001253
152125
Bacillota
GTT
Asn
>WENV170548309
CXUD01000806
8087
Bacillota
TGA
Ser
>WENV170548312
CXUD01001253
8087
Bacillota
TGA
Ser
>WENV170548318
CXUD01001350
8087
Bacillota
TGA
Ser
>WENV170548341
CXUD01001883
8087
Bacillota
TGA
Ser
>WENV170548348
CXUD01002175
8087
Bacillota
TGA
Ser
>WENV170548326
CXUD01001401
37247
Bacillota
TAA
Leu
>WENV170548297
CXUD01000240
413491
Bacillota
CCA
Trp
>WENV170548327
CXUD01001477
38124
Bacillota
AAG
Leu
>WENV170548302
CXUD01000434
38124
Bacillota
AAG
Leu
>WENV170548331
CXUD01001615
428908
Bacillota
GCA
Cys
>WENV170548300
CXUD01000240
59274
Bacillota
CAA
Leu
>WENV170548303
CXUD01000570
147496
Bacillota
TCT
Arg
>WENV170548354
CXUD01002198
158721
Bacillota
GAT
Ile
>WENV170548321
CXUD01001350
158721
Bacillota
GAT
Ile
>WENV170548316
CXUD01001253
158721
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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