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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170548326
CXUD01001401
47021
Bacillota
TAA
Leu
>WENV170548298
CXUD01000240
257203
Bacillota
GTG
His
>WENV170548302
CXUD01000434
42100
Bacillota
AAG
Leu
>WENV170548327
CXUD01001477
42100
Bacillota
AAG
Leu
>WENV170548323
CXUD01001364
377841
Bacillota
CCG
Arg
>WENV170548331
CXUD01001615
458543
Bacillota
GCA
Cys
>WENV170548300
CXUD01000240
64722
Bacillota
CAA
Leu
>WENV170548310
CXUD01001111
271387
Bacillota
CCT
Arg
>WENV170548297
CXUD01000240
448057
Bacillota
CCA
Trp
>WENV170548301
CXUD01000280
90471
Bacillota
CAG
Leu
>WENV170548317
CXUD01001253
158500
Bacillota
GTT
Asn
>WENV170548294
CXUD01000202
271388
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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