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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170564930
CZQC01000067
115067
Gammaproteobacteria
GTA
Tyr
>WENV170564928
CZQC01000066
279385
Gammaproteobacteria
TTT
Lys
>WENV170564929
CZQC01000066
279385
Gammaproteobacteria
TTT
Lys
>WENV170564921
CZQC01000050
17426
Gammaproteobacteria
GCT
Ser
>WENV170564916
CZQC01000047
146791
Gammaproteobacteria
GAC
Val
>WENV170564902
CZQC01000023
289927
Gammaproteobacteria
GAA
Phe
>WENV170564908
CZQC01000036
319098
Gammaproteobacteria
TAC
Val
>WENV170564910
CZQC01000036
319098
Gammaproteobacteria
TAC
Val
>WENV170564912
CZQC01000036
319098
Gammaproteobacteria
TAC
Val
>WENV170564893
CZQC01000001
145713
Gammaproteobacteria
CAT
Met
>WENV170564899
CZQC01000006
243485
Gammaproteobacteria
TGT
Thr
>WENV170564926
CZQC01000066
249892
Gammaproteobacteria
GTT
Asn
>WENV170564901
CZQC01000016
249892
Gammaproteobacteria
GTT
Asn
>WENV170564923
CZQC01000050
203054
Gammaproteobacteria
ACG
Arg
>WENV170564922
CZQC01000050
203054
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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